Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC112698.1-201ENST00000510299 916 ntBASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 OR6D1P-202ENST00000641007 5290 ntBASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB1Q9Y5F3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 DDX43P3-201ENST00000441064 443 ntBASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 SAPCD2P3-201ENST00000455031 850 ntBASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 AP005901.3-202ENST00000581653 237 ntBASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 NSUN5P1-202ENST00000421140 1535 ntBASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 NSUN5P2-203ENST00000457352 1529 ntBASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB1Q9Y5F3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB1Q9Y5F3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PCDHB1Q9Y5F3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 KRT8P47-201ENST00000604727 1398 ntBASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 AC091607.1-201ENST00000490318 1060 ntBASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 AF238378.1-201ENST00000526806 358 ntBASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 TP73-AS1-207ENST00000624167 988 ntBASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB1Q9Y5F3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 MTCL1P1-201ENST00000446207 792 ntBASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 GUSBP12-201ENST00000513727 720 ntBASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 AF228730.7-201ENST00000641842 219 ntBASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms