Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 ELK2BP-201ENST00000415014 1224 ntBASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 RNA5SP416-201ENST00000516838 111 ntBASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 AL139424.1-201ENST00000607572 797 ntBASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.87■□□□□ 0.61
PRG3Q9Y2Y8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 AC108751.1-201ENST00000490852 363 ntBASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 AC010327.4-202ENST00000591484 748 ntBASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 AL589182.2-201ENST00000619332 1049 ntBASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.86■□□□□ 0.61
PRG3Q9Y2Y8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 AC104581.1-202ENST00000635932 2618 ntBASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 AC003669.1-201ENST00000334569 611 ntBASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 AC006504.4-201ENST00000592118 1568 ntBASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRG3Q9Y2Y8 BX276092.7-203ENST00000637198 1536 ntBASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 AC004706.3-202ENST00000621574 984 ntBASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 PGM5P2-202ENST00000637225 1043 ntBASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms