Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 AC026366.1-201ENST00000488803 879 ntBASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 LINC01451-201ENST00000623792 534 ntBASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP3Q9Y2W7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
KCNIP3Q9Y2W7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 KRT18P23-201ENST00000435622 1283 ntBASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 AC011506.1-201ENST00000474329 610 ntBASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KCNIP3Q9Y2W7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 B3GAT3P1-201ENST00000471720 806 ntBASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KCNIP3Q9Y2W7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms