Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 AC007064.4-201ENST00000637740 555 ntBASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC27.18■■□□□ 1.94
CDK11AQ9UQ88 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 AC074386.1-202ENST00000463561 864 ntBASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC27.17■■□□□ 1.94
CDK11AQ9UQ88 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 PNMT-202ENST00000394246 821 ntTSL 2 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 METTL23-205ENST00000588302 925 ntTSL 5 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDK11AQ9UQ88 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 AP000344.2-201ENST00000512987 629 ntBASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 AC023141.13-201ENST00000604991 943 ntBASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 AC025580.3-201ENST00000617932 1424 ntBASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDK11AQ9UQ88 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 ACTG1P4-201ENST00000425123 1122 ntBASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 MIR3197-201ENST00000582241 73 ntBASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 ORC5-208ENST00000626700 344 ntTSL 3 BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDK11AQ9UQ88 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDK11AQ9UQ88 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDK11AQ9UQ88 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CDK11AQ9UQ88 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC27.14■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms