Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PCDHA4Q9UN74 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 TSPY19P-201ENST00000418461 509 ntBASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 TSPY18P-201ENST00000441642 509 ntBASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHA4Q9UN74 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 KRT8P10-201ENST00000450021 1447 ntBASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 AL591684.3-201ENST00000605187 298 ntBASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 AL121772.3-201ENST00000610840 674 ntBASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 AD001527.2-201ENST00000622994 785 ntBASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHA4Q9UN74 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 AL353593.2-201ENST00000602529 1483 ntBASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 KRT18P31-201ENST00000506277 1292 ntBASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHA4Q9UN74 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHA4Q9UN74 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms