Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 OR6D1P-202ENST00000641007 5290 ntBASIC16.23■□□□□ 0.19
LRFN1Q9P244 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 RPS2P1-201ENST00000434010 821 ntBASIC16.23■□□□□ 0.19
LRFN1Q9P244 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 AC139887.3-201ENST00000568585 713 ntBASIC16.23■□□□□ 0.19
LRFN1Q9P244 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 AL049840.3-201ENST00000602669 611 ntBASIC16.23■□□□□ 0.19
LRFN1Q9P244 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 MIR7706-201ENST00000613747 67 ntBASIC16.23■□□□□ 0.19
LRFN1Q9P244 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.23■□□□□ 0.19
LRFN1Q9P244 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRFN1Q9P244 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 OR7E14P-202ENST00000530490 1290 ntBASIC16.22■□□□□ 0.19
LRFN1Q9P244 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 AF228730.7-201ENST00000641842 219 ntBASIC16.22■□□□□ 0.19
LRFN1Q9P244 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 AC243591.1-201ENST00000452967 1364 ntBASIC16.22■□□□□ 0.19
LRFN1Q9P244 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRFN1Q9P244 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.22■□□□□ 0.19
LRFN1Q9P244 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms