Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 AC027601.4-201ENST00000611259 610 ntBASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 AC104109.2-201ENST00000602919 1418 ntBASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 TP73-AS1-210ENST00000637775 1455 ntBASIC18.71■□□□□ 0.59
ARHGEF3Q9NR81 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
ARHGEF3Q9NR81 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.71■□□□□ 0.58
ARHGEF3Q9NR81 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 AC145285.3-201ENST00000564603 959 ntBASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 ANO7L1-203ENST00000602586 1720 ntBASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF3Q9NR81 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 MED15P5-201ENST00000423150 992 ntBASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 AP001269.4-201ENST00000609611 512 ntBASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 AC055717.3-201ENST00000622967 595 ntBASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 IRX1P1-201ENST00000438849 1838 ntBASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF3Q9NR81 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms