Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TIMMDC1Q9NPL8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 AC034236.2-201ENST00000606662 1610 ntBASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 HOXB1-202ENST00000577092 1414 ntBASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 UPK3BP1-201ENST00000428678 509 ntBASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TIMMDC1Q9NPL8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 PCDHB19P-201ENST00000570871 2371 ntBASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 AP001094.4-201ENST00000579008 2176 ntBASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TIMMDC1Q9NPL8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 MIR3917-201ENST00000580971 93 ntBASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 AC083849.1-201ENST00000615227 514 ntBASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 HYMAI.1-201ENST00000620949 238 ntBASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 AC068587.9-201ENST00000641814 219 ntBASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMMDC1Q9NPL8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms