Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 KRT8P26-201ENST00000534154 1276 ntBASIC16.92■□□□□ 0.3
BRF2Q9HAW0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 AL592071.1-201ENST00000611956 408 ntBASIC16.92■□□□□ 0.3
BRF2Q9HAW0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 AC010460.3-201ENST00000511359 1579 ntBASIC16.92■□□□□ 0.3
BRF2Q9HAW0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 OR6D1P-202ENST00000641007 5290 ntBASIC16.92■□□□□ 0.3
BRF2Q9HAW0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BRF2Q9HAW0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 LYSMD4-203ENST00000378904 2122 ntBASIC16.91■□□□□ 0.3
BRF2Q9HAW0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BRF2Q9HAW0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 AL031133.1-201ENST00000406807 723 ntBASIC16.9■□□□□ 0.3
BRF2Q9HAW0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.9■□□□□ 0.3
BRF2Q9HAW0 AC124864.1-201ENST00000623408 392 ntBASIC16.9■□□□□ 0.3
BRF2Q9HAW0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRF2Q9HAW0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms