Protein–RNA interactions for Protein: Q9H930

SP140L, Nuclear body protein SP140-like protein, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP140LQ9H930 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.14■□□□□ 0.17
SP140LQ9H930 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.14■□□□□ 0.17
SP140LQ9H930 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.14■□□□□ 0.17
SP140LQ9H930 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.14■□□□□ 0.17
SP140LQ9H930 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.14■□□□□ 0.17
SP140LQ9H930 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.14■□□□□ 0.17
SP140LQ9H930 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.14■□□□□ 0.17
SP140LQ9H930 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SP140LQ9H930 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
SP140LQ9H930 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SP140LQ9H930 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SP140LQ9H930 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.13■□□□□ 0.17
SP140LQ9H930 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.13■□□□□ 0.17
SP140LQ9H930 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.13■□□□□ 0.17
SP140LQ9H930 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 C2orf69P3-201ENST00000565542 1120 ntBASIC16.13■□□□□ 0.17
SP140LQ9H930 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 GPAT2P1-201ENST00000444924 1672 ntBASIC16.13■□□□□ 0.17
SP140LQ9H930 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.13■□□□□ 0.17
SP140LQ9H930 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.13■□□□□ 0.17
SP140LQ9H930 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SP140LQ9H930 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SP140LQ9H930 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.12■□□□□ 0.17
SP140LQ9H930 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.12■□□□□ 0.17
SP140LQ9H930 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SP140LQ9H930 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SP140LQ9H930 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SP140LQ9H930 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms