Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 AL118508.1-201ENST00000613502 2345 ntBASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 NSUN5P1-202ENST00000421140 1535 ntBASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 NSUN5P2-203ENST00000457352 1529 ntBASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 HLA-J-202ENST00000469281 1241 ntBASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SCAF1Q9H7N4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 METTL21AP1-201ENST00000438852 635 ntBASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 DNAJB3-202ENST00000449667 1266 ntBASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCAF1Q9H7N4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 KRT18P28-201ENST00000453838 1332 ntBASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 CYMP-203ENST00000474680 1263 ntBASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 AC104629.1-201ENST00000494226 508 ntBASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 EMC4-208ENST00000559078 599 ntTSL 3 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCAF1Q9H7N4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 AC104109.2-201ENST00000602919 1418 ntBASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 AC036111.1-201ENST00000533973 1582 ntBASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 YBX2P1-201ENST00000394192 760 ntBASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.37■■□□□ 1.81
SCAF1Q9H7N4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms