Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 MIR940-201ENST00000401276 94 ntBASIC20.58■□□□□ 0.89
SH2D4AQ9H788 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 AL356488.2-201ENST00000602755 427 ntBASIC20.58■□□□□ 0.89
SH2D4AQ9H788 FAM197Y3-203ENST00000618346 717 ntBASIC20.58■□□□□ 0.89
SH2D4AQ9H788 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 AC026471.1-201ENST00000564629 3026 ntBASIC20.58■□□□□ 0.88
SH2D4AQ9H788 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH2D4AQ9H788 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 MED15P5-201ENST00000423150 992 ntBASIC20.57■□□□□ 0.88
SH2D4AQ9H788 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 AC034105.1-201ENST00000563488 319 ntBASIC20.57■□□□□ 0.88
SH2D4AQ9H788 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.57■□□□□ 0.88
SH2D4AQ9H788 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4AQ9H788 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AC135050.7-201ENST00000624508 2218 ntBASIC20.56■□□□□ 0.88
SH2D4AQ9H788 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 KRT18P27-201ENST00000427733 1299 ntBASIC20.56■□□□□ 0.88
SH2D4AQ9H788 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AC005593.1-201ENST00000624894 515 ntBASIC20.56■□□□□ 0.88
SH2D4AQ9H788 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 AC090164.3-201ENST00000610780 2143 ntBASIC20.56■□□□□ 0.88
SH2D4AQ9H788 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SH2D4AQ9H788 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms