Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 AC008687.5-201ENST00000593746 558 ntBASIC17.83■□□□□ 0.44
VPS11Q9H270 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 AC092865.7-201ENST00000641832 219 ntBASIC17.83■□□□□ 0.44
VPS11Q9H270 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.83■□□□□ 0.44
VPS11Q9H270 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
VPS11Q9H270 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VPS11Q9H270 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS11Q9H270 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS11Q9H270 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS11Q9H270 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS11Q9H270 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VPS11Q9H270 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VPS11Q9H270 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VPS11Q9H270 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS11Q9H270 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VPS11Q9H270 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS11Q9H270 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS11Q9H270 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS11Q9H270 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS11Q9H270 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS11Q9H270 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
VPS11Q9H270 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS11Q9H270 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
VPS11Q9H270 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VPS11Q9H270 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS11Q9H270 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VPS11Q9H270 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS11Q9H270 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS11Q9H270 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.81■□□□□ 0.44
VPS11Q9H270 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS11Q9H270 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VPS11Q9H270 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
VPS11Q9H270 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 TSPY15P-201ENST00000457163 923 ntBASIC17.81■□□□□ 0.44
VPS11Q9H270 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.81■□□□□ 0.44
VPS11Q9H270 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS11Q9H270 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.81■□□□□ 0.44
VPS11Q9H270 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.81■□□□□ 0.44
VPS11Q9H270 NAPSB-206ENST00000562112 1266 ntBASIC17.81■□□□□ 0.44
VPS11Q9H270 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
VPS11Q9H270 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.81■□□□□ 0.44
VPS11Q9H270 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS11Q9H270 AC010947.1-201ENST00000623454 693 ntBASIC17.81■□□□□ 0.44
VPS11Q9H270 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VPS11Q9H270 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.81■□□□□ 0.44
VPS11Q9H270 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VPS11Q9H270 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS11Q9H270 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS11Q9H270 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS11Q9H270 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.8■□□□□ 0.44
VPS11Q9H270 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS11Q9H270 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS11Q9H270 ECEL1P2-202ENST00000465689 757 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms