Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 ECEL1P3-201ENST00000427961 737 ntBASIC15.68■□□□□ 0.1
MMP28Q9H239 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MMP28Q9H239 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP28Q9H239 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP28Q9H239 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
MMP28Q9H239 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP28Q9H239 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP28Q9H239 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP28Q9H239 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
MMP28Q9H239 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.67■□□□□ 0.1
MMP28Q9H239 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP28Q9H239 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.67■□□□□ 0.1
MMP28Q9H239 AP001412.1-201ENST00000608405 714 ntBASIC15.67■□□□□ 0.1
MMP28Q9H239 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP28Q9H239 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MMP28Q9H239 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MMP28Q9H239 AC079328.2-201ENST00000561241 3354 ntBASIC15.67■□□□□ 0.1
MMP28Q9H239 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MMP28Q9H239 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.67■□□□□ 0.1
MMP28Q9H239 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.66■□□□□ 0.1
MMP28Q9H239 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
MMP28Q9H239 AL357033.4-201ENST00000617703 1807 ntBASIC15.66■□□□□ 0.1
MMP28Q9H239 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP28Q9H239 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MMP28Q9H239 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MMP28Q9H239 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MMP28Q9H239 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 TSPY23P-201ENST00000440136 739 ntBASIC15.66■□□□□ 0.1
MMP28Q9H239 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.66■□□□□ 0.1
MMP28Q9H239 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.66■□□□□ 0.1
MMP28Q9H239 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MMP28Q9H239 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.66■□□□□ 0.1
MMP28Q9H239 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP28Q9H239 CR392000.1-201ENST00000624770 1228 ntBASIC15.66■□□□□ 0.1
MMP28Q9H239 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MMP28Q9H239 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MMP28Q9H239 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.66■□□□□ 0.1
MMP28Q9H239 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MMP28Q9H239 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.66■□□□□ 0.1
MMP28Q9H239 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 AL138688.1-201ENST00000624851 1594 ntBASIC15.66■□□□□ 0.1
MMP28Q9H239 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MMP28Q9H239 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MMP28Q9H239 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP28Q9H239 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.65■□□□□ 0.1
MMP28Q9H239 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP28Q9H239 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP28Q9H239 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MMP28Q9H239 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.65■□□□□ 0.1
MMP28Q9H239 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
MMP28Q9H239 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MMP28Q9H239 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.65■□□□□ 0.1
MMP28Q9H239 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MMP28Q9H239 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms