Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM6Q9C030 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM6Q9C030 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM6Q9C030 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM6Q9C030 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM6Q9C030 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM6Q9C030 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 MRPL3P1-201ENST00000400109 1033 ntBASIC19.42■□□□□ 0.7
TRIM6Q9C030 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.42■□□□□ 0.7
TRIM6Q9C030 AC007967.3-201ENST00000434308 558 ntBASIC19.42■□□□□ 0.7
TRIM6Q9C030 AC106795.1-205ENST00000512851 1056 ntBASIC19.42■□□□□ 0.7
TRIM6Q9C030 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 AL355877.3-201ENST00000622820 899 ntBASIC19.42■□□□□ 0.7
TRIM6Q9C030 TP73-AS1-207ENST00000624167 988 ntBASIC19.42■□□□□ 0.7
TRIM6Q9C030 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 AC097374.2-201ENST00000618617 1306 ntBASIC19.42■□□□□ 0.7
TRIM6Q9C030 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM6Q9C030 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRIM6Q9C030 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 SCARNA2-201ENST00000458748 420 ntBASIC19.41■□□□□ 0.7
TRIM6Q9C030 AF186996.4-201ENST00000467186 377 ntBASIC19.41■□□□□ 0.7
TRIM6Q9C030 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 AP001269.4-201ENST00000609611 512 ntBASIC19.41■□□□□ 0.7
TRIM6Q9C030 AC090164.3-201ENST00000610780 2143 ntBASIC19.41■□□□□ 0.7
TRIM6Q9C030 AL139384.1-201ENST00000612143 3047 ntBASIC19.41■□□□□ 0.7
TRIM6Q9C030 KRT8P47-201ENST00000604727 1398 ntBASIC19.41■□□□□ 0.7
TRIM6Q9C030 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM6Q9C030 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM6Q9C030 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.4■□□□□ 0.7
TRIM6Q9C030 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 ABCD1P5-201ENST00000445663 754 ntBASIC19.4■□□□□ 0.7
TRIM6Q9C030 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM6Q9C030 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM6Q9C030 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms