Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC3Q9BY71 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC3Q9BY71 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC3Q9BY71 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC3Q9BY71 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC3Q9BY71 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.41■□□□□ 0.54
LRRC3Q9BY71 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.41■□□□□ 0.54
LRRC3Q9BY71 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LRRC3Q9BY71 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.4■□□□□ 0.54
LRRC3Q9BY71 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 AC136632.2-201ENST00000512891 861 ntBASIC18.4■□□□□ 0.54
LRRC3Q9BY71 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 AC055717.3-201ENST00000622967 595 ntBASIC18.4■□□□□ 0.54
LRRC3Q9BY71 PGM5P2-202ENST00000637225 1043 ntBASIC18.4■□□□□ 0.54
LRRC3Q9BY71 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC3Q9BY71 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC3Q9BY71 AC009949.1-201ENST00000623048 1830 ntBASIC18.39■□□□□ 0.54
LRRC3Q9BY71 AC007613.1-201ENST00000572811 2597 ntBASIC18.39■□□□□ 0.54
LRRC3Q9BY71 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC3Q9BY71 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC3Q9BY71 AC009113.1-201ENST00000570267 2443 ntBASIC18.39■□□□□ 0.53
LRRC3Q9BY71 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 AC005104.2-201ENST00000427818 678 ntBASIC18.39■□□□□ 0.53
LRRC3Q9BY71 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 AC007967.2-201ENST00000432613 625 ntBASIC18.39■□□□□ 0.53
LRRC3Q9BY71 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 MIR1199-201ENST00000621445 119 ntBASIC18.39■□□□□ 0.53
LRRC3Q9BY71 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 AC104581.1-202ENST00000635932 2618 ntBASIC18.39■□□□□ 0.53
LRRC3Q9BY71 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms