Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 GCSHP2-201ENST00000560971 527 ntBASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC009154.2-201ENST00000621177 724 ntBASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC016396.2-201ENST00000562575 1417 ntBASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 NKILA-202ENST00000614771 2598 ntBASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 KRT18P22-201ENST00000402024 1347 ntBASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SHANK2-AS3Q9BTD1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 RASA4DP-201ENST00000460726 1199 ntBASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 AL136038.4-201ENST00000603606 1261 ntBASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 AC084018.2-201ENST00000613093 2607 ntBASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHANK2-AS3Q9BTD1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms