Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.67■□□□□ 0.1
VRK1Q99986 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.67■□□□□ 0.1
VRK1Q99986 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.67■□□□□ 0.1
VRK1Q99986 MIR3652-201ENST00000579335 131 ntBASIC15.67■□□□□ 0.1
VRK1Q99986 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VRK1Q99986 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VRK1Q99986 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VRK1Q99986 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 Z83836.1-201ENST00000624605 1642 ntBASIC15.67■□□□□ 0.1
VRK1Q99986 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
VRK1Q99986 MTMR9LP-203ENST00000426597 1545 ntBASIC15.67■□□□□ 0.1
VRK1Q99986 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 KRT18P1-202ENST00000452408 1331 ntBASIC15.67■□□□□ 0.1
VRK1Q99986 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VRK1Q99986 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
VRK1Q99986 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.66■□□□□ 0.1
VRK1Q99986 CHCHD2P8-201ENST00000429873 447 ntBASIC15.66■□□□□ 0.1
VRK1Q99986 SLC25A6P5-201ENST00000435663 894 ntBASIC15.66■□□□□ 0.1
VRK1Q99986 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.66■□□□□ 0.1
VRK1Q99986 PRELID1P1-202ENST00000567272 903 ntBASIC15.66■□□□□ 0.1
VRK1Q99986 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
VRK1Q99986 RNF126P1-202ENST00000569893 925 ntBASIC15.66■□□□□ 0.1
VRK1Q99986 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 NPAP1P7-201ENST00000613027 823 ntBASIC15.66■□□□□ 0.1
VRK1Q99986 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VRK1Q99986 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 CROCCP1-201ENST00000426910 5675 ntBASIC15.66■□□□□ 0.1
VRK1Q99986 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VRK1Q99986 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VRK1Q99986 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VRK1Q99986 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.65■□□□□ 0.1
VRK1Q99986 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 AC080080.1-201ENST00000625121 2420 ntBASIC15.65■□□□□ 0.1
VRK1Q99986 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.65■□□□□ 0.1
VRK1Q99986 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.65■□□□□ 0.1
VRK1Q99986 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.65■□□□□ 0.1
VRK1Q99986 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 DUSP5P1-201ENST00000441325 1139 ntBASIC15.65■□□□□ 0.1
VRK1Q99986 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.65■□□□□ 0.1
VRK1Q99986 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.65■□□□□ 0.1
VRK1Q99986 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.65■□□□□ 0.1
VRK1Q99986 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.65■□□□□ 0.1
VRK1Q99986 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.65■□□□□ 0.1
VRK1Q99986 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.65■□□□□ 0.1
VRK1Q99986 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.65■□□□□ 0.1
VRK1Q99986 AP002414.4-201ENST00000589764 1148 ntBASIC15.65■□□□□ 0.1
VRK1Q99986 AC012313.10-201ENST00000623509 926 ntBASIC15.65■□□□□ 0.1
VRK1Q99986 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VRK1Q99986 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 KRT8P50-201ENST00000562022 1438 ntBASIC15.65■□□□□ 0.1
VRK1Q99986 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VRK1Q99986 AC099343.3-201ENST00000605834 2503 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms