Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDNQ99608 AC080080.1-201ENST00000625121 2420 ntBASIC17.79■□□□□ 0.44
NDNQ99608 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
NDNQ99608 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 AL645608.8-201ENST00000606034 2086 ntBASIC17.78■□□□□ 0.44
NDNQ99608 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NDNQ99608 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NDNQ99608 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.78■□□□□ 0.44
NDNQ99608 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 TSPY5P-201ENST00000426936 936 ntBASIC17.78■□□□□ 0.44
NDNQ99608 KRT18P48-201ENST00000434763 852 ntBASIC17.78■□□□□ 0.44
NDNQ99608 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.78■□□□□ 0.44
NDNQ99608 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.78■□□□□ 0.44
NDNQ99608 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.78■□□□□ 0.44
NDNQ99608 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 PKD1P1-201ENST00000458669 6805 ntBASIC17.78■□□□□ 0.44
NDNQ99608 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDNQ99608 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.78■□□□□ 0.44
NDNQ99608 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NDNQ99608 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.77■□□□□ 0.44
NDNQ99608 AL596257.1-201ENST00000641463 2694 ntBASIC17.77■□□□□ 0.44
NDNQ99608 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.77■□□□□ 0.44
NDNQ99608 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NDNQ99608 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NDNQ99608 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NDNQ99608 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 FAM8A6P-201ENST00000407496 1135 ntBASIC17.77■□□□□ 0.44
NDNQ99608 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.77■□□□□ 0.44
NDNQ99608 KRT18P65-201ENST00000439811 1286 ntBASIC17.77■□□□□ 0.44
NDNQ99608 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.77■□□□□ 0.44
NDNQ99608 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.77■□□□□ 0.44
NDNQ99608 LINC01023-201ENST00000606054 436 ntBASIC17.77■□□□□ 0.44
NDNQ99608 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.77■□□□□ 0.44
NDNQ99608 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.77■□□□□ 0.44
NDNQ99608 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDNQ99608 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDNQ99608 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NDNQ99608 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NDNQ99608 KRT8P47-201ENST00000604727 1398 ntBASIC17.77■□□□□ 0.43
NDNQ99608 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.77■□□□□ 0.43
NDNQ99608 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NDNQ99608 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NDNQ99608 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.77■□□□□ 0.43
NDNQ99608 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NDNQ99608 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDNQ99608 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.76■□□□□ 0.43
NDNQ99608 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NDNQ99608 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 RNF152P1-201ENST00000397754 604 ntBASIC17.76■□□□□ 0.43
NDNQ99608 AK4P3-201ENST00000418260 669 ntBASIC17.76■□□□□ 0.43
NDNQ99608 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.76■□□□□ 0.43
NDNQ99608 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.76■□□□□ 0.43
NDNQ99608 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.76■□□□□ 0.43
NDNQ99608 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.76■□□□□ 0.43
NDNQ99608 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.76■□□□□ 0.43
NDNQ99608 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.76■□□□□ 0.43
NDNQ99608 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.76■□□□□ 0.43
NDNQ99608 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
NDNQ99608 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.76■□□□□ 0.43
NDNQ99608 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDNQ99608 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms