Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 AC011467.4-201ENST00000594891 528 ntBASIC18.92■□□□□ 0.62
YME1L1Q96TA2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
YME1L1Q96TA2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 MIR770-201ENST00000390219 98 ntBASIC18.91■□□□□ 0.62
YME1L1Q96TA2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 AC096734.2-201ENST00000562054 433 ntBASIC18.91■□□□□ 0.62
YME1L1Q96TA2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.91■□□□□ 0.62
YME1L1Q96TA2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 AC018445.3-201ENST00000624177 1945 ntBASIC18.9■□□□□ 0.62
YME1L1Q96TA2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 FAM58CP-201ENST00000435741 640 ntBASIC18.9■□□□□ 0.62
YME1L1Q96TA2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 KRT19P2-202ENST00000557173 1012 ntBASIC18.9■□□□□ 0.62
YME1L1Q96TA2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 AC109462.3-201ENST00000573934 613 ntBASIC18.9■□□□□ 0.62
YME1L1Q96TA2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 AC027612.4-201ENST00000605371 583 ntBASIC18.9■□□□□ 0.62
YME1L1Q96TA2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
YME1L1Q96TA2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
YME1L1Q96TA2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
YME1L1Q96TA2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
YME1L1Q96TA2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 STK19B-204ENST00000512515 211 ntBASIC18.89■□□□□ 0.61
YME1L1Q96TA2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 GGTLC5P-201ENST00000617623 998 ntBASIC18.89■□□□□ 0.61
YME1L1Q96TA2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 AC093028.1-201ENST00000622998 982 ntBASIC18.89■□□□□ 0.61
YME1L1Q96TA2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.89■□□□□ 0.61
YME1L1Q96TA2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms