Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB18PQ96TA0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB18PQ96TA0 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 AC016734.2-201ENST00000624325 1377 ntBASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 AL138831.2-201ENST00000606564 490 ntBASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB18PQ96TA0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 AC090616.6-201ENST00000582640 721 ntBASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 AC019129.2-201ENST00000609837 1235 ntBASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB18PQ96TA0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms