Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 AC093909.1-201ENST00000504731 1122 ntBASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 RNPS1P1-201ENST00000507437 918 ntBASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 AC019129.2-201ENST00000609837 1235 ntBASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK5RAP1Q96SZ6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 SPDYE21P-201ENST00000413323 827 ntBASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 AL020989.1-201ENST00000422979 469 ntBASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 PRYP5-201ENST00000451909 266 ntBASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 AC018712.1-201ENST00000455767 687 ntBASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 AC109462.3-201ENST00000573934 613 ntBASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
CDK5RAP1Q96SZ6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDK5RAP1Q96SZ6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 KLF4P1-201ENST00000412782 1185 ntBASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 SART3-203ENST00000546611 1184 ntBASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 AP001005.1-201ENST00000571755 1248 ntBASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 NKAPP1-205ENST00000585790 367 ntBASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 AL022326.1-202ENST00000641533 845 ntBASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms