Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BBS4Q96RK4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BBS4Q96RK4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 DDX43P3-201ENST00000441064 443 ntBASIC16.8■□□□□ 0.28
BBS4Q96RK4 MTCL1P1-201ENST00000446207 792 ntBASIC16.8■□□□□ 0.28
BBS4Q96RK4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BBS4Q96RK4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.8■□□□□ 0.28
BBS4Q96RK4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 AC068472.1-201ENST00000474589 881 ntBASIC16.79■□□□□ 0.28
BBS4Q96RK4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BBS4Q96RK4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BBS4Q96RK4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 FAM210CP-201ENST00000445714 574 ntBASIC16.78■□□□□ 0.28
BBS4Q96RK4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 GUSBP12-201ENST00000513727 720 ntBASIC16.78■□□□□ 0.28
BBS4Q96RK4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
BBS4Q96RK4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BBS4Q96RK4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.77■□□□□ 0.28
BBS4Q96RK4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BBS4Q96RK4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms