Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 SPDYE15P-201ENST00000424157 909 ntBASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 HLA-F-220ENST00000434407 884 ntBASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2AAQ96QV6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 AC012317.2-201ENST00000623305 2251 ntBASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2AAQ96QV6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST1H2AAQ96QV6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms