Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 AC008677.1-201ENST00000519230 1561 ntBASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 GNAS-203ENST00000306120 1878 ntBASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 KLF2P3-201ENST00000451977 1087 ntBASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 AL358472.5-202ENST00000641448 1267 ntBASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 FAM58CP-201ENST00000435741 640 ntBASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CSMD1Q96PZ7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CSMD1Q96PZ7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.96□□□□□ -0.02
CSMD1Q96PZ7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CSMD1Q96PZ7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 SPTLC1P1-201ENST00000447199 261 ntBASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 AC125807.1-201ENST00000483097 614 ntBASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 AC132938.6-201ENST00000623828 1655 ntBASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 PIN1P1-201ENST00000412108 996 ntBASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 GPS2P2-201ENST00000430745 888 ntBASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 SIRPAP1-201ENST00000448467 1770 ntBASIC14.95□□□□□ -0.02
CSMD1Q96PZ7 KRT8P47-201ENST00000604727 1398 ntBASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AC112698.1-201ENST00000510299 916 ntBASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AL049757.1-201ENST00000616842 1596 ntBASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AC141586.3-201ENST00000562166 1838 ntBASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AC132938.5-201ENST00000624980 1813 ntBASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 AL512356.2-201ENST00000546955 174 ntBASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.94□□□□□ -0.02
CSMD1Q96PZ7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms