Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TIMM8BP1-201ENST00000452384 211 ntBASIC19.07■□□□□ 0.64
LRCH3Q96II8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 SPDYE22P-201ENST00000582158 798 ntBASIC19.07■□□□□ 0.64
LRCH3Q96II8 AC023141.13-201ENST00000604991 943 ntBASIC19.07■□□□□ 0.64
LRCH3Q96II8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LRCH3Q96II8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCH3Q96II8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 AC007064.4-201ENST00000637740 555 ntBASIC19.06■□□□□ 0.64
LRCH3Q96II8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRCH3Q96II8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.06■□□□□ 0.64
LRCH3Q96II8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 MIR149-201ENST00000384879 89 ntBASIC19.05■□□□□ 0.64
LRCH3Q96II8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 TREML5P-201ENST00000421694 576 ntBASIC19.05■□□□□ 0.64
LRCH3Q96II8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AC068137.2-201ENST00000605408 478 ntBASIC19.05■□□□□ 0.64
LRCH3Q96II8 AC012183.1-201ENST00000625197 499 ntBASIC19.05■□□□□ 0.64
LRCH3Q96II8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCH3Q96II8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.05■□□□□ 0.64
LRCH3Q96II8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 AC107890.1-201ENST00000422478 521 ntBASIC19.04■□□□□ 0.64
LRCH3Q96II8 KRT17P7-201ENST00000451704 1104 ntBASIC19.04■□□□□ 0.64
LRCH3Q96II8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRCH3Q96II8 IGHV3-42-201ENST00000520410 361 ntBASIC19.04■□□□□ 0.64
LRCH3Q96II8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRCH3Q96II8 HILS1-202ENST00000545329 423 ntBASIC19.04■□□□□ 0.64
LRCH3Q96II8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms