Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 TSPY14P-201ENST00000303979 915 ntBASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 AC145285.6-201ENST00000604632 637 ntBASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
FOXRED1Q96CU9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 LINC01568-207ENST00000641790 1380 ntBASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 DDX43P3-201ENST00000441064 443 ntBASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.42■□□□□ 0.06
FOXRED1Q96CU9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 AC211429.1-201ENST00000415277 523 ntBASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 AC010653.2-201ENST00000623505 997 ntBASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 AC097493.4-201ENST00000641197 219 ntBASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 NKILA-202ENST00000614771 2598 ntBASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FOXRED1Q96CU9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms