Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 AC004951.3-201ENST00000418645 1148 ntBASIC16.25■□□□□ 0.19
HPS1Q92902 SERPINA7P1-201ENST00000443077 631 ntBASIC16.25■□□□□ 0.19
HPS1Q92902 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.25■□□□□ 0.19
HPS1Q92902 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.25■□□□□ 0.19
HPS1Q92902 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.25■□□□□ 0.19
HPS1Q92902 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.25■□□□□ 0.19
HPS1Q92902 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HPS1Q92902 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.25■□□□□ 0.19
HPS1Q92902 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 AC105020.1-201ENST00000435356 2205 ntBASIC16.25■□□□□ 0.19
HPS1Q92902 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HPS1Q92902 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HPS1Q92902 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HPS1Q92902 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.24■□□□□ 0.19
HPS1Q92902 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 AC104417.2-201ENST00000562989 1793 ntBASIC16.24■□□□□ 0.19
HPS1Q92902 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 TSPY14P-201ENST00000303979 915 ntBASIC16.24■□□□□ 0.19
HPS1Q92902 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 ARMC10P1-201ENST00000313754 855 ntBASIC16.24■□□□□ 0.19
HPS1Q92902 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HPS1Q92902 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HPS1Q92902 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 LIN28AP1-201ENST00000429574 405 ntBASIC16.24■□□□□ 0.19
HPS1Q92902 KRT18P35-201ENST00000510488 1269 ntBASIC16.24■□□□□ 0.19
HPS1Q92902 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.24■□□□□ 0.19
HPS1Q92902 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.24■□□□□ 0.19
HPS1Q92902 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.24■□□□□ 0.19
HPS1Q92902 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HPS1Q92902 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.24■□□□□ 0.19
HPS1Q92902 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.24■□□□□ 0.19
HPS1Q92902 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HPS1Q92902 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.24■□□□□ 0.19
HPS1Q92902 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HPS1Q92902 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
HPS1Q92902 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HPS1Q92902 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HPS1Q92902 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 AC073508.3-201ENST00000619697 1419 ntBASIC16.23■□□□□ 0.19
HPS1Q92902 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.23■□□□□ 0.19
HPS1Q92902 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.23■□□□□ 0.19
HPS1Q92902 AC097488.1-201ENST00000507834 756 ntBASIC16.23■□□□□ 0.19
HPS1Q92902 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.23■□□□□ 0.19
HPS1Q92902 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.23■□□□□ 0.19
HPS1Q92902 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.23■□□□□ 0.19
HPS1Q92902 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.23■□□□□ 0.19
HPS1Q92902 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HPS1Q92902 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms