Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF139Q8WU17 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF139Q8WU17 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF139Q8WU17 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF139Q8WU17 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 AC067852.2-201ENST00000590513 2313 ntBASIC18.59■□□□□ 0.57
RNF139Q8WU17 RCN1P2-201ENST00000398357 915 ntBASIC18.59■□□□□ 0.57
RNF139Q8WU17 AC096633.1-201ENST00000422446 749 ntBASIC18.59■□□□□ 0.57
RNF139Q8WU17 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 MIR5100-201ENST00000579544 119 ntBASIC18.59■□□□□ 0.57
RNF139Q8WU17 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 IFNL4P1-201ENST00000607083 540 ntBASIC18.59■□□□□ 0.57
RNF139Q8WU17 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF139Q8WU17 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF139Q8WU17 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF139Q8WU17 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF139Q8WU17 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF139Q8WU17 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF139Q8WU17 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF139Q8WU17 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF139Q8WU17 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF139Q8WU17 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF139Q8WU17 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF139Q8WU17 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF139Q8WU17 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF139Q8WU17 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RNF139Q8WU17 AC011467.2-201ENST00000598425 242 ntBASIC18.58■□□□□ 0.56
RNF139Q8WU17 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF139Q8WU17 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF139Q8WU17 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF139Q8WU17 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF139Q8WU17 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms