Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.58■□□□□ 0.24
NUP43Q8NFH3 AL138688.1-201ENST00000624851 1594 ntBASIC16.58■□□□□ 0.24
NUP43Q8NFH3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.58■□□□□ 0.24
NUP43Q8NFH3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 AC139713.2-201ENST00000641328 2723 ntBASIC16.57■□□□□ 0.24
NUP43Q8NFH3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 KRT8P26-201ENST00000534154 1276 ntBASIC16.57■□□□□ 0.24
NUP43Q8NFH3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 IGHV3-41-201ENST00000613121 348 ntBASIC16.57■□□□□ 0.24
NUP43Q8NFH3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.57■□□□□ 0.24
NUP43Q8NFH3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 AC141586.5-201ENST00000624546 2050 ntBASIC16.57■□□□□ 0.24
NUP43Q8NFH3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUP43Q8NFH3 LTB4R2-202ENST00000528054 3092 ntBASIC16.56■□□□□ 0.24
NUP43Q8NFH3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 AC005332.1-201ENST00000577698 1310 ntBASIC16.56■□□□□ 0.24
NUP43Q8NFH3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 AC096633.1-201ENST00000422446 749 ntBASIC16.56■□□□□ 0.24
NUP43Q8NFH3 RN7SL606P-201ENST00000472779 293 ntBASIC16.56■□□□□ 0.24
NUP43Q8NFH3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 AC090616.6-201ENST00000582640 721 ntBASIC16.56■□□□□ 0.24
NUP43Q8NFH3 AL592071.1-201ENST00000611956 408 ntBASIC16.56■□□□□ 0.24
NUP43Q8NFH3 AL590326.2-201ENST00000625139 305 ntBASIC16.56■□□□□ 0.24
NUP43Q8NFH3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUP43Q8NFH3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NUP43Q8NFH3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms