Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
ARHGEF28Q8N1W1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 AC107918.2-201ENST00000530817 355 ntBASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC24.29■■□□□ 1.48
ARHGEF28Q8N1W1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 AL354751.1-201ENST00000412768 1863 ntBASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 SLC25A6P2-201ENST00000497974 877 ntBASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 AP000344.2-201ENST00000512987 629 ntBASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 MIR4469-201ENST00000583919 79 ntBASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 AC004877.2-201ENST00000623941 599 ntBASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARHGEF28Q8N1W1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 AC005829.1-201ENST00000570002 483 ntBASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 AC091812.2-201ENST00000619081 385 ntBASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 AC104581.1-202ENST00000635932 2618 ntBASIC24.27■■□□□ 1.48
ARHGEF28Q8N1W1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC24.27■■□□□ 1.47
ARHGEF28Q8N1W1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ARHGEF28Q8N1W1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms