Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 CHCHD2P8-201ENST00000429873 447 ntBASIC17.11■□□□□ 0.33
KRT78Q8N1N4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 VENTXP7-201ENST00000475503 772 ntBASIC17.11■□□□□ 0.33
KRT78Q8N1N4 KRT18P35-201ENST00000510488 1269 ntBASIC17.11■□□□□ 0.33
KRT78Q8N1N4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 AC005332.8-201ENST00000622750 2735 ntBASIC17.11■□□□□ 0.33
KRT78Q8N1N4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT78Q8N1N4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 ARMC10P1-201ENST00000313754 855 ntBASIC17.1■□□□□ 0.33
KRT78Q8N1N4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 MIR1224-201ENST00000408193 85 ntBASIC17.1■□□□□ 0.33
KRT78Q8N1N4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 AP000550.4-202ENST00000639755 178 ntBASIC17.1■□□□□ 0.33
KRT78Q8N1N4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
KRT78Q8N1N4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 AC096633.1-201ENST00000422446 749 ntBASIC17.09■□□□□ 0.33
KRT78Q8N1N4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 AC010331.1-201ENST00000611423 582 ntBASIC17.09■□□□□ 0.33
KRT78Q8N1N4 LINC01451-201ENST00000623792 534 ntBASIC17.09■□□□□ 0.33
KRT78Q8N1N4 AC097374.2-201ENST00000618617 1306 ntBASIC17.09■□□□□ 0.33
KRT78Q8N1N4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.09■□□□□ 0.33
KRT78Q8N1N4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRT78Q8N1N4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
KRT78Q8N1N4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms