Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC25.96■■□□□ 1.75
ABCA6Q8N139 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC25.96■■□□□ 1.75
ABCA6Q8N139 AC079140.1-201ENST00000508039 487 ntBASIC25.96■■□□□ 1.75
ABCA6Q8N139 GATB-205ENST00000508611 605 ntTSL 2 BASIC25.96■■□□□ 1.75
ABCA6Q8N139 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC25.96■■□□□ 1.75
ABCA6Q8N139 AC008761.3-201ENST00000624803 892 ntBASIC25.96■■□□□ 1.75
ABCA6Q8N139 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC25.96■■□□□ 1.75
ABCA6Q8N139 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 FAM185BP-201ENST00000443595 716 ntBASIC25.96■■□□□ 1.75
ABCA6Q8N139 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ABCA6Q8N139 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC25.96■■□□□ 1.75
ABCA6Q8N139 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
ABCA6Q8N139 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA6Q8N139 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA6Q8N139 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA6Q8N139 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA6Q8N139 HNRNPFP1-201ENST00000391730 1133 ntBASIC25.95■■□□□ 1.74
ABCA6Q8N139 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 OARD1-208ENST00000469104 704 ntTSL 2 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 AC125807.1-201ENST00000483097 614 ntBASIC25.95■■□□□ 1.74
ABCA6Q8N139 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 TSFM-210ENST00000550559 897 ntTSL 5 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA6Q8N139 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ABCA6Q8N139 AL390754.1-201ENST00000619088 582 ntBASIC25.95■■□□□ 1.74
ABCA6Q8N139 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
ABCA6Q8N139 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC25.94■■□□□ 1.74
ABCA6Q8N139 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 IGHV3-52-201ENST00000519770 353 ntBASIC25.94■■□□□ 1.74
ABCA6Q8N139 AL512356.2-201ENST00000546955 174 ntBASIC25.94■■□□□ 1.74
ABCA6Q8N139 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC25.94■■□□□ 1.74
ABCA6Q8N139 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC25.94■■□□□ 1.74
ABCA6Q8N139 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.94■■□□□ 1.74
ABCA6Q8N139 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.94■■□□□ 1.74
ABCA6Q8N139 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ABCA6Q8N139 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA6Q8N139 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA6Q8N139 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA6Q8N139 AC002056.1-201ENST00000395613 760 ntBASIC25.93■■□□□ 1.74
ABCA6Q8N139 TREML5P-201ENST00000421694 576 ntBASIC25.93■■□□□ 1.74
ABCA6Q8N139 TSPY16P-201ENST00000449843 468 ntBASIC25.93■■□□□ 1.74
ABCA6Q8N139 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC25.93■■□□□ 1.74
ABCA6Q8N139 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
ABCA6Q8N139 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA6Q8N139 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC25.93■■□□□ 1.74
ABCA6Q8N139 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC25.93■■□□□ 1.74
ABCA6Q8N139 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA6Q8N139 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ABCA6Q8N139 AL096828.2-201ENST00000567259 1965 ntBASIC25.92■■□□□ 1.74
ABCA6Q8N139 TFAMP1-201ENST00000412727 736 ntBASIC25.92■■□□□ 1.74
ABCA6Q8N139 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC25.92■■□□□ 1.74
ABCA6Q8N139 SPDYE14P-201ENST00000442619 822 ntBASIC25.92■■□□□ 1.74
ABCA6Q8N139 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
ABCA6Q8N139 CRB3P1-201ENST00000449338 276 ntBASIC25.92■■□□□ 1.74
ABCA6Q8N139 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
ABCA6Q8N139 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA6Q8N139 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
ABCA6Q8N139 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA6Q8N139 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA6Q8N139 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC25.92■■□□□ 1.74
ABCA6Q8N139 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA6Q8N139 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
ABCA6Q8N139 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA6Q8N139 AC107890.1-201ENST00000422478 521 ntBASIC25.92■■□□□ 1.74
ABCA6Q8N139 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ABCA6Q8N139 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
ABCA6Q8N139 FO538757.1-201ENST00000623083 1397 ntBASIC25.92■■□□□ 1.74
ABCA6Q8N139 HARS-203ENST00000431330 1774 ntTSL 2 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA6Q8N139 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA6Q8N139 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC25.91■■□□□ 1.74
ABCA6Q8N139 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA6Q8N139 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ABCA6Q8N139 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms