Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 WRB-204ENST00000398753 699 ntTSL 3 BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
XRN1Q8IZH2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC24.31■■□□□ 1.48
XRN1Q8IZH2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 FAM58DP-201ENST00000428076 619 ntBASIC24.31■■□□□ 1.48
XRN1Q8IZH2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
XRN1Q8IZH2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 AC002056.1-201ENST00000395613 760 ntBASIC24.3■■□□□ 1.48
XRN1Q8IZH2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 AC079140.1-201ENST00000508039 487 ntBASIC24.3■■□□□ 1.48
XRN1Q8IZH2 GATB-205ENST00000508611 605 ntTSL 2 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
XRN1Q8IZH2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 AC005034.1-201ENST00000426657 489 ntBASIC24.29■■□□□ 1.48
XRN1Q8IZH2 KLF2P3-201ENST00000451977 1087 ntBASIC24.29■■□□□ 1.48
XRN1Q8IZH2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 AL512356.2-201ENST00000546955 174 ntBASIC24.29■■□□□ 1.48
XRN1Q8IZH2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 RN7SL204P-201ENST00000582831 262 ntBASIC24.29■■□□□ 1.48
XRN1Q8IZH2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 POR-209ENST00000439269 1858 ntTSL 2 BASIC24.29■■□□□ 1.48
XRN1Q8IZH2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 AC093677.2-201ENST00000600169 1863 ntBASIC24.28■■□□□ 1.48
XRN1Q8IZH2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 FAM207CP-201ENST00000443486 507 ntBASIC24.28■■□□□ 1.48
XRN1Q8IZH2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
XRN1Q8IZH2 CROCCP3-202ENST00000420820 1947 ntBASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms