Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 VENTXP7-201ENST00000475503 772 ntBASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 BNIP3P18-201ENST00000593976 575 ntBASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 KRT18P1-202ENST00000452408 1331 ntBASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
ZC3H3Q8IXZ2 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 IGHV3-52-201ENST00000519770 353 ntBASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZC3H3Q8IXZ2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZC3H3Q8IXZ2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.14■□□□□ 0.66
ZC3H3Q8IXZ2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 KRT17P6-201ENST00000453795 1220 ntBASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 TP73-AS1-210ENST00000637775 1455 ntBASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ZC3H3Q8IXZ2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 INTS4P1-201ENST00000438455 1935 ntBASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 TOB2P1-201ENST00000469761 992 ntBASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 AL121761.2-201ENST00000598007 1648 ntBASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 AC046185.3-201ENST00000623228 1824 ntBASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.13■□□□□ 0.65
ZC3H3Q8IXZ2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ZC3H3Q8IXZ2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H3Q8IXZ2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H3Q8IXZ2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZC3H3Q8IXZ2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.12■□□□□ 0.65
ZC3H3Q8IXZ2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms