Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AC002558.1-201ENST00000488906 803 ntBASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AF238378.1-201ENST00000526806 358 ntBASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AC109462.3-201ENST00000573934 613 ntBASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AP005117.1-201ENST00000584346 1413 ntBASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AL353593.2-201ENST00000602529 1483 ntBASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C9orf40Q8IXQ3 AC067852.2-201ENST00000590513 2313 ntBASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 RBM17P3-201ENST00000417687 1192 ntBASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 TPM4P1-201ENST00000436100 807 ntBASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 AC008608.2-201ENST00000606089 416 ntBASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf40Q8IXQ3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 FAAHP1-202ENST00000446499 1238 ntBASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AC079781.3-201ENST00000449110 356 ntBASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AL355877.3-201ENST00000622820 899 ntBASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 GNAS-203ENST00000306120 1878 ntBASIC16.3■□□□□ 0.2
C9orf40Q8IXQ3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms