Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 BICD1-207ENST00000551848 1962 ntBASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SCN4BQ8IWT1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 AC103564.2-201ENST00000432853 1299 ntBASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 AC021087.4-201ENST00000563761 564 ntBASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 NKAPP1-205ENST00000585790 367 ntBASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCN4BQ8IWT1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
SCN4BQ8IWT1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.64■□□□□ 0.58
SCN4BQ8IWT1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCN4BQ8IWT1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AP000347.1-202ENST00000435868 847 ntBASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AC018712.1-201ENST00000455767 687 ntBASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 BX005266.1-201ENST00000473402 457 ntBASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AL139288.1-201ENST00000623748 933 ntBASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms