Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 AC009065.1-201ENST00000564055 1225 ntBASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 DOC2GP-204ENST00000639052 2548 ntBASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF111Q6ZNA4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 AL138688.1-201ENST00000624851 1594 ntBASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 AC010240.3-201ENST00000607688 395 ntBASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 LINC02199-201ENST00000506655 2702 ntBASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF111Q6ZNA4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.21■□□□□ 0.34
RNF111Q6ZNA4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF111Q6ZNA4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RNF111Q6ZNA4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 AL049597.2-201ENST00000565575 961 ntBASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 LINC01238-205ENST00000567549 1107 ntBASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 AC099343.3-201ENST00000605834 2503 ntBASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
RNF111Q6ZNA4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms