Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNI2Q6ZMN8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 AC005332.1-201ENST00000577698 1310 ntBASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 AC007663.1-201ENST00000438948 1240 ntBASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 AC069148.1-201ENST00000608741 768 ntBASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCNI2Q6ZMN8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNI2Q6ZMN8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 MFAP1P1-201ENST00000442257 1255 ntBASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 OR6D1P-202ENST00000641007 5290 ntBASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNI2Q6ZMN8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CCNI2Q6ZMN8 CICP6-201ENST00000457191 2729 ntBASIC18.77■□□□□ 0.59
CCNI2Q6ZMN8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.77■□□□□ 0.59
CCNI2Q6ZMN8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNI2Q6ZMN8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.77■□□□□ 0.59
CCNI2Q6ZMN8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.77■□□□□ 0.59
CCNI2Q6ZMN8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCNI2Q6ZMN8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms