Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL54Q6P161 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL54Q6P161 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL54Q6P161 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MRPL54Q6P161 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL54Q6P161 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL54Q6P161 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
MRPL54Q6P161 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 AC016769.1-201ENST00000409132 1010 ntBASIC13.4□□□□□ -0.26
MRPL54Q6P161 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 AC231657.2-201ENST00000624556 255 ntBASIC13.4□□□□□ -0.26
MRPL54Q6P161 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL54Q6P161 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
MRPL54Q6P161 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
MRPL54Q6P161 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.39□□□□□ -0.27
MRPL54Q6P161 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 AL121829.2-201ENST00000620908 328 ntBASIC13.39□□□□□ -0.27
MRPL54Q6P161 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MRPL54Q6P161 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.39□□□□□ -0.27
MRPL54Q6P161 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 LINC00304-203ENST00000565008 1864 ntBASIC13.38□□□□□ -0.27
MRPL54Q6P161 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.38□□□□□ -0.27
MRPL54Q6P161 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MRPL54Q6P161 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms