Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SLBP-205ENST00000488267 987 ntTSL 2 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 AC009093.7-201ENST00000623853 1223 ntBASIC22.11■■□□□ 1.13
RC3H1Q5TC82 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RC3H1Q5TC82 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 AC002056.1-201ENST00000395613 760 ntBASIC22.1■■□□□ 1.13
RC3H1Q5TC82 AL627223.1-201ENST00000416693 442 ntBASIC22.1■■□□□ 1.13
RC3H1Q5TC82 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 AC092474.2-201ENST00000424288 719 ntBASIC22.1■■□□□ 1.13
RC3H1Q5TC82 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RC3H1Q5TC82 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 FAM86GP-201ENST00000448322 971 ntBASIC22.09■■□□□ 1.13
RC3H1Q5TC82 MIR4745-201ENST00000577608 62 ntBASIC22.09■■□□□ 1.13
RC3H1Q5TC82 AL390955.2-201ENST00000603032 514 ntBASIC22.09■■□□□ 1.13
RC3H1Q5TC82 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RC3H1Q5TC82 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 NMU-203ENST00000507338 658 ntTSL 3 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 AC026120.1-201ENST00000611536 926 ntBASIC22.08■■□□□ 1.13
RC3H1Q5TC82 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.08■■□□□ 1.13
RC3H1Q5TC82 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
RC3H1Q5TC82 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RC3H1Q5TC82 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.08■■□□□ 1.12
RC3H1Q5TC82 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RC3H1Q5TC82 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RC3H1Q5TC82 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
RC3H1Q5TC82 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
RC3H1Q5TC82 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 AC067863.1-201ENST00000494933 530 ntBASIC22.07■■□□□ 1.12
RC3H1Q5TC82 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 AQP6-203ENST00000551733 849 ntTSL 3 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 AJ011932.1-201ENST00000621707 465 ntBASIC22.07■■□□□ 1.12
RC3H1Q5TC82 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RC3H1Q5TC82 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms