Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 INTS4P1-201ENST00000438455 1935 ntBASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 AP001269.4-201ENST00000609611 512 ntBASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 AC132938.6-201ENST00000623828 1655 ntBASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
SNAP47Q5SQN1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AL031284.1-201ENST00000419297 478 ntBASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 KRT18P67-201ENST00000432816 1264 ntBASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AC073648.2-201ENST00000510116 352 ntBASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AL355877.3-201ENST00000622820 899 ntBASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNAP47Q5SQN1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SNAP47Q5SQN1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.21■□□□□ 0.34
SNAP47Q5SQN1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SNAP47Q5SQN1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
SNAP47Q5SQN1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 AL138781.2-201ENST00000617896 1843 ntBASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNAP47Q5SQN1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms