Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 TOB2P1-201ENST00000469761 992 ntBASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBWD3Q5JTY5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 LYSMD4-203ENST00000378904 2122 ntBASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 AC069148.1-201ENST00000608741 768 ntBASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 AC019129.2-201ENST00000609837 1235 ntBASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 AC091076.1-201ENST00000610741 619 ntBASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CBWD3Q5JTY5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.09■□□□□ 0.65
CBWD3Q5JTY5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 AC012313.1-201ENST00000593393 3059 ntBASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CBWD3Q5JTY5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 LINC00265-3P-201ENST00000447588 903 ntBASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.08■□□□□ 0.64
CBWD3Q5JTY5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms