Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USH1GQ495M9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USH1GQ495M9 BX640515.1-201ENST00000617215 977 ntBASIC20.3■□□□□ 0.84
USH1GQ495M9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USH1GQ495M9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
USH1GQ495M9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
USH1GQ495M9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USH1GQ495M9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
USH1GQ495M9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USH1GQ495M9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
USH1GQ495M9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USH1GQ495M9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USH1GQ495M9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USH1GQ495M9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 AL049757.1-201ENST00000616842 1596 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.29■□□□□ 0.84
USH1GQ495M9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.29■□□□□ 0.84
USH1GQ495M9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 KRT18P55-202ENST00000578578 1546 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 BX276092.7-203ENST00000637198 1536 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
USH1GQ495M9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.29■□□□□ 0.84
USH1GQ495M9 DDX43P3-201ENST00000441064 443 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 SLC25A1P1-201ENST00000528351 927 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 OR7E14P-202ENST00000530490 1290 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.29■□□□□ 0.84
USH1GQ495M9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 AC109462.3-201ENST00000573934 613 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.29■□□□□ 0.84
USH1GQ495M9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.29■□□□□ 0.84
USH1GQ495M9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.29■□□□□ 0.84
USH1GQ495M9 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.29■□□□□ 0.84
USH1GQ495M9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
USH1GQ495M9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
USH1GQ495M9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.29■□□□□ 0.84
USH1GQ495M9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USH1GQ495M9 NEFHP1-201ENST00000412845 2629 ntBASIC20.28■□□□□ 0.84
USH1GQ495M9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.28■□□□□ 0.84
USH1GQ495M9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USH1GQ495M9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.28■□□□□ 0.84
USH1GQ495M9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.28■□□□□ 0.84
USH1GQ495M9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.28■□□□□ 0.84
USH1GQ495M9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
USH1GQ495M9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
USH1GQ495M9 AC019129.2-201ENST00000609837 1235 ntBASIC20.28■□□□□ 0.84
USH1GQ495M9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.28■□□□□ 0.84
USH1GQ495M9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.28■□□□□ 0.84
USH1GQ495M9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USH1GQ495M9 AL354751.1-201ENST00000412768 1863 ntBASIC20.28■□□□□ 0.84
USH1GQ495M9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.28■□□□□ 0.84
USH1GQ495M9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.28■□□□□ 0.84
USH1GQ495M9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USH1GQ495M9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USH1GQ495M9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USH1GQ495M9 AC135050.7-201ENST00000624508 2218 ntBASIC20.27■□□□□ 0.84
USH1GQ495M9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.27■□□□□ 0.84
USH1GQ495M9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USH1GQ495M9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.27■□□□□ 0.84
USH1GQ495M9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 AL353593.2-201ENST00000602529 1483 ntBASIC20.27■□□□□ 0.84
USH1GQ495M9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
USH1GQ495M9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.27■□□□□ 0.84
USH1GQ495M9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms