Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL024508.2-201ENST00000607749 1894 ntBASIC16.49■□□□□ 0.23
RFX4Q33E94 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RFX4Q33E94 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RFX4Q33E94 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RFX4Q33E94 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RFX4Q33E94 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.49■□□□□ 0.23
RFX4Q33E94 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RFX4Q33E94 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX4Q33E94 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RFX4Q33E94 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX4Q33E94 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
RFX4Q33E94 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
RFX4Q33E94 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.48■□□□□ 0.23
RFX4Q33E94 AL139384.1-201ENST00000612143 3047 ntBASIC16.48■□□□□ 0.23
RFX4Q33E94 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RFX4Q33E94 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RFX4Q33E94 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.48■□□□□ 0.23
RFX4Q33E94 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.48■□□□□ 0.23
RFX4Q33E94 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 CR769767.2-201ENST00000622735 460 ntBASIC16.48■□□□□ 0.23
RFX4Q33E94 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RFX4Q33E94 AC046158.3-201ENST00000624947 2558 ntBASIC16.48■□□□□ 0.23
RFX4Q33E94 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFX4Q33E94 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX4Q33E94 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 PCDHA14-201ENST00000506751 2298 ntBASIC16.48■□□□□ 0.23
RFX4Q33E94 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
RFX4Q33E94 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFX4Q33E94 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RFX4Q33E94 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX4Q33E94 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.48■□□□□ 0.23
RFX4Q33E94 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.48■□□□□ 0.23
RFX4Q33E94 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RFX4Q33E94 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 AC016396.2-201ENST00000562575 1417 ntBASIC16.47■□□□□ 0.23
RFX4Q33E94 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.47■□□□□ 0.23
RFX4Q33E94 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RFX4Q33E94 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFX4Q33E94 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFX4Q33E94 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFX4Q33E94 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX4Q33E94 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFX4Q33E94 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.46■□□□□ 0.23
RFX4Q33E94 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFX4Q33E94 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms