Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1EQ15878 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA1EQ15878 AC023141.13-201ENST00000604991 943 ntBASIC17.12■□□□□ 0.33
CACNA1EQ15878 AL353135.1-201ENST00000606729 504 ntBASIC17.12■□□□□ 0.33
CACNA1EQ15878 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 AC097637.2-201ENST00000624096 1997 ntBASIC17.11■□□□□ 0.33
CACNA1EQ15878 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.11■□□□□ 0.33
CACNA1EQ15878 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 AC091812.2-201ENST00000619081 385 ntBASIC17.11■□□□□ 0.33
CACNA1EQ15878 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA1EQ15878 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1EQ15878 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.1■□□□□ 0.33
CACNA1EQ15878 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CACNA1EQ15878 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA1EQ15878 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 AC025580.3-201ENST00000617932 1424 ntBASIC17.09■□□□□ 0.33
CACNA1EQ15878 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 AC109322.1-201ENST00000524499 1264 ntBASIC17.09■□□□□ 0.33
CACNA1EQ15878 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 AC105339.1-204ENST00000636249 355 ntBASIC17.09■□□□□ 0.33
CACNA1EQ15878 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA1EQ15878 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA1EQ15878 BCAR1-209ENST00000546196 1340 ntBASIC17.09■□□□□ 0.33
CACNA1EQ15878 AC093677.2-201ENST00000600169 1863 ntBASIC17.09■□□□□ 0.33
CACNA1EQ15878 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms