Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST1H1AQ02539 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST1H1AQ02539 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HIST1H1AQ02539 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 ECEL1P2-202ENST00000465689 757 ntBASIC13.58□□□□□ -0.24
HIST1H1AQ02539 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 AC010947.1-201ENST00000623454 693 ntBASIC13.58□□□□□ -0.24
HIST1H1AQ02539 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 AL645608.8-201ENST00000606034 2086 ntBASIC13.58□□□□□ -0.24
HIST1H1AQ02539 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HIST1H1AQ02539 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 AC093010.1-201ENST00000473625 1624 ntBASIC13.57□□□□□ -0.24
HIST1H1AQ02539 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.57□□□□□ -0.24
HIST1H1AQ02539 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HIST1H1AQ02539 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms