Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.81■□□□□ 0.44
AP1S1P61966 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.81■□□□□ 0.44
AP1S1P61966 AD001527.2-201ENST00000622994 785 ntBASIC17.81■□□□□ 0.44
AP1S1P61966 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 AL049757.1-201ENST00000616842 1596 ntBASIC17.81■□□□□ 0.44
AP1S1P61966 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S1P61966 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 LINC00304-203ENST00000565008 1864 ntBASIC17.8■□□□□ 0.44
AP1S1P61966 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
AP1S1P61966 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.8■□□□□ 0.44
AP1S1P61966 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
AP1S1P61966 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
AP1S1P61966 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.8■□□□□ 0.44
AP1S1P61966 SAPCD2P3-201ENST00000455031 850 ntBASIC17.8■□□□□ 0.44
AP1S1P61966 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 AC106795.1-205ENST00000512851 1056 ntBASIC17.8■□□□□ 0.44
AP1S1P61966 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S1P61966 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
AP1S1P61966 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S1P61966 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.8■□□□□ 0.44
AP1S1P61966 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S1P61966 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 AL353593.2-201ENST00000602529 1483 ntBASIC17.8■□□□□ 0.44
AP1S1P61966 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S1P61966 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.8■□□□□ 0.44
AP1S1P61966 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S1P61966 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.79■□□□□ 0.44
AP1S1P61966 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
AP1S1P61966 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
AP1S1P61966 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.79■□□□□ 0.44
AP1S1P61966 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.79■□□□□ 0.44
AP1S1P61966 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.79■□□□□ 0.44
AP1S1P61966 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 AC109462.3-201ENST00000573934 613 ntBASIC17.79■□□□□ 0.44
AP1S1P61966 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 AP001269.4-201ENST00000609611 512 ntBASIC17.79■□□□□ 0.44
AP1S1P61966 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 AP000867.4-201ENST00000641616 219 ntBASIC17.79■□□□□ 0.44
AP1S1P61966 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 HLA-J-201ENST00000462773 1622 ntBASIC17.79■□□□□ 0.44
AP1S1P61966 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S1P61966 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S1P61966 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.78■□□□□ 0.44
AP1S1P61966 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
AP1S1P61966 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP1S1P61966 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.78■□□□□ 0.44
AP1S1P61966 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S1P61966 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.78■□□□□ 0.44
AP1S1P61966 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms