Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
AP3S2P59780 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.23■□□□□ 0.03
AP3S2P59780 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP3S2P59780 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
AP3S2P59780 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 AC004951.3-201ENST00000418645 1148 ntBASIC15.22■□□□□ 0.03
AP3S2P59780 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.22■□□□□ 0.03
AP3S2P59780 AC091390.4-202ENST00000476426 537 ntBASIC15.22■□□□□ 0.03
AP3S2P59780 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.22■□□□□ 0.03
AP3S2P59780 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.22■□□□□ 0.03
AP3S2P59780 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 AC060834.1-201ENST00000443027 2032 ntBASIC15.22■□□□□ 0.03
AP3S2P59780 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.22■□□□□ 0.03
AP3S2P59780 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 AC100803.2-201ENST00000562459 1963 ntBASIC15.22■□□□□ 0.03
AP3S2P59780 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.22■□□□□ 0.03
AP3S2P59780 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP3S2P59780 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
AP3S2P59780 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP3S2P59780 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 TSPY26P-202ENST00000565928 3884 ntBASIC15.21■□□□□ 0.03
AP3S2P59780 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
AP3S2P59780 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 AL023284.2-201ENST00000405850 579 ntBASIC15.21■□□□□ 0.03
AP3S2P59780 ZNRF2P3-201ENST00000424200 374 ntBASIC15.21■□□□□ 0.03
AP3S2P59780 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 UNC93B4-201ENST00000505679 747 ntBASIC15.21■□□□□ 0.03
AP3S2P59780 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.21■□□□□ 0.03
AP3S2P59780 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.21■□□□□ 0.03
AP3S2P59780 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3S2P59780 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
AP3S2P59780 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP3S2P59780 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP3S2P59780 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.21■□□□□ 0.02
AP3S2P59780 AL356309.3-201ENST00000624132 1934 ntBASIC15.21■□□□□ 0.02
AP3S2P59780 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
AP3S2P59780 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
AP3S2P59780 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
AP3S2P59780 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP3S2P59780 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
AP3S2P59780 AC026691.1-201ENST00000602502 2017 ntBASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms