Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
CLDN12P56749 AC022898.2-201ENST00000616822 1312 ntBASIC15.42■□□□□ 0.06
CLDN12P56749 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN12P56749 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CLDN12P56749 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN12P56749 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN12P56749 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN12P56749 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CLDN12P56749 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN12P56749 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN12P56749 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN12P56749 NUDT16P1-203ENST00000513809 620 ntBASIC15.41■□□□□ 0.06
CLDN12P56749 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN12P56749 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.41■□□□□ 0.06
CLDN12P56749 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN12P56749 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN12P56749 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN12P56749 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN12P56749 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CLDN12P56749 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN12P56749 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CLDN12P56749 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CLDN12P56749 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN12P56749 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN12P56749 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN12P56749 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN12P56749 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN12P56749 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN12P56749 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN12P56749 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN12P56749 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN12P56749 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN12P56749 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 AC092666.2-201ENST00000613287 246 ntBASIC15.4■□□□□ 0.06
CLDN12P56749 FAM197Y4-202ENST00000622692 608 ntBASIC15.4■□□□□ 0.06
CLDN12P56749 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN12P56749 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLDN12P56749 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLDN12P56749 FLJ38576-201ENST00000623820 2459 ntBASIC15.4■□□□□ 0.06
CLDN12P56749 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN12P56749 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN12P56749 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN12P56749 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLDN12P56749 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN12P56749 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN12P56749 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms